PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008231041.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 321aa    MW: 35769 Da    PI: 6.1032
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008231041.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.92.5e-20126223195
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +++ d +g  +W++k+++  +++s++yvl+ ++ eFv+a+gL+ gDf++ +  ++ ++
  XP_008231041.1 126 FQKELKNSDVSSLRRMILPKKAAEAHlpALESKEGIPISMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGEFVNAHGLQLGDFIMVY--QDtQN 217
                     99**************************666668889********9*******9989999999***9.******************99..44366 PP

                     E..EEE CS
              B3  90 felvvk 95 
                     +++v++
  XP_008231041.1 218 QNYVIQ 223
                     666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.2E-27117228IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-21124222IPR015300DNA-binding pseudobarrel domain
CDDcd100172.44E-26124226No hitNo description
PROSITE profilePS5086310.095126228IPR003340B3 DNA binding domain
PfamPF023625.2E-17126224IPR003340B3 DNA binding domain
SMARTSM010191.5E-19126228IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MMMDQAAASA AAGLIHHEKT EACGLRAGVE ADLGLVTAKG DKTSFHGSDR SGSIHDHDDL  60
VHAVTSFGVH RKKRMTRQRR SSIINLHHLT FASSTTTTSH VLPSLQPPST LPPARVIDPT  120
RLRFLFQKEL KNSDVSSLRR MILPKKAAEA HLPALESKEG IPISMDDIDG LHVWSFKYRF  180
WPNNNSRMYV LENTGEFVNA HGLQLGDFIM VYQDTQNQNY VIQAKKASDQ DHVYGDISTM  240
NNGVNDLFLD ESEANKSSSF YMPTMAMDED TTAGMSFVYD TTFSNDSLLD FFGGSMTNYS  300
RNGPLHESFG SVENLSLDDY Y
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008231041.10.0PREDICTED: B3 domain-containing transcription factor FUS3
SwissprotQ9LW312e-95FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLM5XG750.0M5XG75_PRUPE; Uncharacterized protein
STRINGGLYMA16G05480.21e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98582838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-94B3 family protein